BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003C09LP1|AL425096
(319 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1797 611 e-175
>3x_Contig1797
Length = 34782
Score = 611 bits (307), Expect = e-175
Identities = 316/319 (99%), Gaps = 1/319 (0%)
Strand = Plus / Minus
Query: 1 tgatgtkgatgatgataacaagcaagaagtggtaatacgcttcctaacgggcactggctg 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4643 tgatgttgatgatgataacaagcaagaagtggtaatacgcttcctaacgggcactggctg 4584
Query: 61 taaacaggagaattttagagttaacggcaagaacgttgatattatcgtagccacattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4583 taaacaggagaattttagagttaacggcaagaacgttgatattatcgtagccacattaaa 4524
Query: 121 aggttctgtatctgtggaagaagttccagcagatattatcgaagacgacgatcaagaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4523 aggttctgtatctgtggaagaagttccagcagatattatcgaagacgacgatcaagaaga 4464
Query: 181 ctcagagaatacgacgtttgtagaatctcatgagaccaccggaggggaatgcaagctctg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4463 ctcagagaatacgacgtttgtagaatctcatgagaccaccggagggg-atgcaagctctg 4405
Query: 241 gcaatagtagagttataaaaagtttcaaagtatcagtatcaaatcctagcaagtttgcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4404 gcaatagtagagttataaaaagtttcaaagtatcagtatcaaatcctagcaagtttgcta 4345
Query: 301 gcaagtatgttgatgasca 319
|||||||||||||||| ||
Sbjct: 4344 gcaagtatgttgatgacca 4326
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2106
Number of Sequences: 1807
Number of extensions: 2106
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 319
length of database: 10,358,551
effective HSP length: 16
effective length of query: 303
effective length of database: 10,329,639
effective search space: 3129880617
effective search space used: 3129880617
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.0 bits)